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… model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide … often by starting with identifying the right ingredients. Researchers collaborating across multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer …

… and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … at Pacific Northwest National Laboratory. The team’s research at both the JGI and EMSL was enabled by the …

… a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting …

RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified …