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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… They’ve spent millions of years evolving tactics against potential threats. “Because plants can’t run away, they’ve … — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a … poop sample, there’s a whole heap of microbes, each potentially contributing to powerful biomass processing. “So …
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JGI Announces 2026 Functional Genomics Recipients
… and omics capabilities to enhance understanding of gene and genome function. Understanding these functions …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… resonance energy transfer (BRET)-based biosensors. In general, CSL biosensors produce large signal changes, but … BRET biosensors have high signal intensity, but produce small signal changes in response to the molecule of … Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a …
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JGI at the AGU Fall Meeting
… Cycling Microbial Communities and Reduces N2O Production Potential in Sacramento-San Joaquin Delta, California” … Wrighton, Colorado State University: “Putting microorganisms on the map: continental-scale context for thousands of … talk): “Effect of drought on soil microbial metabolisms driving carbon allocation and volatile organic compound …
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Cell by cell: population genetics in the wild
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Identification of mobile genetic elements with geNomad
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JGI Launches Latest Strategic Plan
… over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … and ESnet, as well as externally to prospective partners to generate awareness of and clarity about the JGI’s strategic …
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Matt Blow
… University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, … et al. 2021. Persistence and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et … et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557:503-509. Blow et al …
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… primary and secondary metabolites from plants, microorganisms, and environmental samples using targeted and untargeted … et al.  MAGI: A Method for Metabolite Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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