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A More Intuitive Phytozome Interface
… been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST … infrastructure. Phytozome v13 has been accessible to users since 2019.  We have attempted to make sure users will … bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome …
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Data Ecosystem
… partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a … and help unravel these complexities  This ecosystem serves users better in the following ways: Data integration is … by artificial intelligence and other tools. By bringing users together through our systems, we build far-reaching …
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How Filamentous Fungi Sense Food
… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high …
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after … Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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JGI Portals
… GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing … potential, antibiotic resistance genes, and ecosystem information. … tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to …
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Better Genome Editing for Bioenergy
… Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to identify which … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No.  …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the … work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and …
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Cataloging the Microbes that Manage the Health of River Systems
… States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to … not only how researchers can successfully partner with DOE user facilities and resources on such large-scale multi-omic …
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Team Science Reveals Important Protein in Poplar
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … traits.  Partly enabled by the JGI  Community Science Program New Investigator program , BNL scientists focused on the protein PtrbHLH011   … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of …
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