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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, I …
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The JGI announces 2024 awardees for our Community Science Program annual call
Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected … CSP proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that …
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Natural Prodcast Episode 3: The Primer, Part 3
… state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … suggestions for others feel free to let me know by emailing jgi[email protected], or reaching out on Twitter to @JGI or me @danudwary. Like I said in the intro to the first …
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Natural Prodcast Episode 2: The Primer, Part 2
… maybe obvious or notable. We are still in – not an early stage. I think we can identify most secondary metabolism … yeah. I mean, you might be producing things at different stages of growth or different signals from the environment … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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Natural Prodcast Episode 12: Nadine Ziemert
… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … of secondary metabolite pathways as viewed through metagenome studies, and what more JGI and others can do to …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … the idea that you could go internationally to do the next stage of your training and that there might be more to be … to try and create an open source database of all known microbial natural products. So if you think about natural …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Natural Prodcast Episode 17: Cassandra Quave
… of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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