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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical … by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary metabolites," …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is critical for plants in the … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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Graduate Students Get Thesis Research Opportunity at the JGI
… between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … Tringe’s research group focuses on the roles of microbial communities in wetland carbon cycling and the interactions … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, … classroom modules Testimonials: … A primary purpose of this project is to bring educators from a broad range of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … study suggests, is displacing these important cold-water communities of algae with warm-adapted ones, a trend that … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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A toolkit for microbial community editing
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Work With the JGI! Tips for a Winning CSP Proposal
Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and … stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times a year. A few proposal calls have …
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type …
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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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