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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… National Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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Accelerating Metagenomics Discoveries with Deep Learning
… learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … in proteins that low sequence identity may belie. The technology he’s using is magical; transform any length of … they’re not as reliable on amino acid sequences.) Sevim is currently using HMM profiles of protein domains from …
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DAS Tool for Genome Reconstruction from Metagenomes
… with the ETOP mission of providing JGI users with the most current technology and expertise in order to address pressing energy …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
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Tanja Woyke
… for Ocean Sciences Single Cell Genomics Center (2013-current) Science Advisory Board Member for Science Department, Berkeley City College, (2015-current) Organizing Committee Board Member for Lake … Advisory Committee member for the Center for Biotechnology and Bioinformatics at Virginia State University …
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Refining the Process of Identifying Algae Biotechnology Candidates
… This research was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s …
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since … in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE … Engineering (PECASE) awarded by President Obama Dr. Northen currently serves as the Deputy Director of the Environmental …
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How to Target a Microbial Needle within a Community Haystack
… for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast … about environmental samples starts with researchers first sequencing the complex community and then separating out the … Opportunity Program . The ETOP helps researchers develop technology that can then be made available to JGI users in …
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Eelgrass Proves to Be Much Younger Than We Thought
… 250,000 years ago, when eelgrass traveled across the ocean current from Japan to colonize the southern California and … duplication event — bioinformatics expertise, as well as sequencing for all global populations of eelgrass used in … US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and …
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … National Laboratory Berkeley Lab), have taken stock of the current state of microbial genomic biodiversity. Using … data are publicly available in the National Center for Biotechnology Information (NCBI) GenBank collection and on the …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… Júnia Schultz is currently a postdoctoral fellow at the Biological and … Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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JGI Workshops at PAG
… technologies, keen interest in the bioenergy and biotechnology potential of algae, and sampling of the length … BER Plant Genomic Science In this workshop, we will present current and ongoing developments at the JGI and KBase toward …
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