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Antonio Camargo
Antonio’s research is focusing on the development of new … and classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data
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Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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Estimating DNA coverage and abundance in metagenomes using a gamma approximation
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Fungal & Algal Program User Advisory Committee
… is chartered by the Science Program Heads and report back to them. The Committee is chartered to render advice, … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). … and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral …
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iPHoP: A Matchmaker for Phages and their Hosts
… fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus …
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of …
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