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… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … of these photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome …

… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. … Washburn Hot Springs in Yellowstone National Park. This large geothermal pool contains high levels of sulfur, …

… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … . If you look at the space that they occupy on a global scale, it’s less than 1% of the coastal area worldwide. But … senior authors. The team was also compelled to study these large bacteria in light of their potential interactions with …

… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for … the air, plant rhizosphere, wastewater, and even animal and human (for the first time) gut and taxonomically classified …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) … functional assay lets us move beyond cataloging the genes of microorganisms and start making quantitative …

… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … capability; no one else can do it in the world at this scale.” A bottleneck in the DAP-seq protocol, however, is … multiDAP, which allows researchers to conduct comparative analyses across the genomes of multiple species in a single …

… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of … genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. …

… Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy … were less resistant to disease compared to the controls.  Analyses to understand how the protein influences poplar … plant cells. JBEI also contributed to lignin and flavonoid analyses. Additionally, x-ray bioimaging experiments were …

… metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced … to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … that were missed using traditional approaches. This novel form of intermediate expression, when used in addition …