Search

… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …

… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis …

… available metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… In honor of the JGI's 25th anniversary in 2022, we have … (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … Agricultural University (China), Texas A&M University System, U.S. Department of Agriculture-Agricultural Research …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … Dr. Fagnan was on the organizing committees for the ASCR Integrated Research Infrastructure - Architecture Blueprint …

… partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched … The class was also able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could open avenues for using bacteria to … how such inter-Facility collaborations through the Genomes to Structure and Function focus area of the JGI’s … and Environmental Research (BER) missions. The JGI provides integrated high-throughput sequencing and computational …

… one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … logistical and analytical. How can the research community systematically sample an ancient, hyperdiverse kingdom while …