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Making a Lichen Together
For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … autonomy; they can be isolated and grown separately from each other. A possible explanation, according to the … of Genomic Sciences and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD …
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Scientific Advisory Committee
… of the scientific programs at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of Biological and Environmental Research …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … Schulz et al. (2020) Advantages and limits of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … simpler (and smaller) models, Miscanthus has a large and complex genome whose evolutionary history and perennial …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … : “The best part of the internship is the welcome and open community of the JGI. Everyone is excited to learn and share …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Natural Prodcast
… to the chemicals that make species unique and different from one another. They are incredibly important to medicine, … as an important line of communication to the scientific community. Host Dan Udwary talks to luminaries in the field …
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