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JGI & KBase at PAG XXVII
Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake … Reports. Print copies will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Below find a list of the six researchers accepted for 2023. Proposals are accepted year-round; the next deadline …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … has grown exponentially. The latest release, IMG/VR v4 features over 15 million viral genomes, and  this most …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Below find a list of the final six researchers accepted for 2022. Proposals are accepted year-round; the next deadline …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … They are also the primary producers in the marine food web, forming the base of the food chain and providing energy for … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Calculating the Costs of Multiple Switchgrass Gene Copies
A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … previous study conducted by our research team surveying the genomic and phenotypic diversity across the natural range of … more broadly allow us to assess how ploidy variation alters genomic diversity, fitness, and adaptability. Using a …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … and the IMG/M team developed several updates and features to mine the GEM catalog. ( Watch this IMG webinar …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … Their partnership is widespread and cosmopolitan: more than 20,000 ascomycete species and hundreds of microalgae are … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues …
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