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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published … Genome Inside: THE Bioenergy Tree …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence …
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Sequencing crop genomes: approaches and applications
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Selection to sequence: opportunities in fungal genomics
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers … Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. hallii … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have … This the second episode of Natural Prodcast, which continues a conversation from the …
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