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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Nikos Kyrpides
… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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Draft genome of Rosenbergiella nectarea strain 8N4T provides insights into the potential role of this species in its plant host
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At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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JGI Scientists Pen Genome Watch Articles
Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute focuses on … spread the word among her JGI colleagues, and they agreed, providing three articles for the journal with Du Toit as …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational … Genomes & Microbiomes (IMG/M) system. “We then looked into many more samples and refined our methodology,” Neri …
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