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User Support Analysis Group
… analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment … being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly … for standard sequencing products performed at scale. Our group also performs ‘proof-of principle’ research …
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Biology of Fungi and Their Bacterial Endosymbionts
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Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a … be the first publicly available, river-focused microbial resource that provides information at multiple scales from … to study river microbiomes. To understand the microbiology of watershed systems, they utilized over 160 river …
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Leo Baumgart
… Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, … and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation … and as an Adjunct Professor at the School of Natural Sciences at the University of California, Merced. Dr. Visel … Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major …
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JGI@25
… We revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … by Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … Software team and metagenomic data platform at Zymergen, a synthetic biology company that went public and was later acquired by … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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Integrating Experimentation with Data
… Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint meeting! … Topics included:  Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled Laboratory Automation, Data … JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls … CSP call , and the results are described in ACS Chemical Biology. Using fluorescent biosensors to monitor the …
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Secondary Metabolites Advisory Committee
… on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external … teams on how to operate and manage the particular Science Program. …
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Operating Expenses
… Research (BER), a program within the DOE Office of Science. …
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