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… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral …

… contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around …

…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence … the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer professional development … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for …

The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … to novel traits. M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …

Over the course of the summer, the JGI-UC Merced Genomics Internship … effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the JGI internship has … Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer internship with the JGI …

JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …

… user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The … his time with the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career …

… trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by … metabolomic profiles — combined offers the global research community insights into how these trees adapt to different …

Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary … overview and major challenges of host prediction methods for uncultivated phages.  Current Opinion in Virology .  49 … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  …

Analysis reveals the microbial community involved in a bioremediation effort. The Science … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … ago. The NRAP site is still being monitored and the team plans to continue collecting data to understand the ERD …

… in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … supported by the NSF grants  DEB-1354625 and  IOS-1456958 . Sequencing of  Dothideomycetes genomes were conducted as …