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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the benefit … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile original data for improving fungal …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in length, while the previous version had an average of 25,000 bp pieces. That’s the difference between assembling a …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive … sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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JGI Workshop at 2025 Aquatic Sciences Meeting
… Details forthcoming at ASLO 2025 Aquatic Sciences Meeting …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … populations respond to virus infections, researchers are using Altiarchaea as a model system to study virus-host …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … scan for those snowflakes, or RNA virus sequences. Using this workflow, the team combed through more than 5,000 …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… Júnia Schultz is currently a postdoctoral fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … of the Microscale Applications group at the JGI, whose team uses a semi-automated, standardized process to carry … Biological and Environmental Research (BER) missions. The JGI provides integrated high-throughput sequencing and …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and … (online) Town Hall on the role of user facilities in accelerating research and tips for submitting successful proposals: … 4pm CST Convention Center, Poster Hall D-F poster B25J-1604: Eoin Brodie, Berkeley Lab: “Uncovering microbial …
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Computationally Classifying Fungal Lifestyles
… As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dothideomycetes . The data allowed the team to reclassify 25  Dothideomycetes species, and also provides more …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … call, a Letter of Intent (LOI) is required by the due date printed below. Proposals will be invited from those …
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