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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the … mat, the virus-to-host ratio for most pairs was close to 1. Even the most abundant virus was only 11 times more abundant than its host. There just don’t seem …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming majority of the ground … serve the ecosystem by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters …
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Metabolomics
… grow, as well as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… which archives and makes available for research over 100,000 samples and specimens of over 60 different types of … learn more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: … Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at …
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JGI@25: Studying Sorghum’s Survival Skills
… thanks to its drought and flood hardiness. Even with little water, full sunlight and hot temperatures, sorghum plants … and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain … is the fastest way for plants to convert carbon dioxide and water into sugars and oxygen. Both sugarcane and corn share …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… but is increasingly farmed in other countries for essential oil production. The recent assembly of two Corymbia … inhabit different environments. Eucalyptus species prefer cooler, more temperate or sub-tropical environments, while … tissues of C. citriodora . From these samples, a total of 127 TPS loci were found, many of which had high sequence …
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Soil virus offers insight into maintaining microorganisms
… effort, researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in part by a community data … three domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down …
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Learning to Look
… be spotted with a striped scarf, striped hat, round-rimmed glasses, or a cane, but only Waldo will have all of these … inoviruses are in every major microbial habitat—including soil, water, and humans—around the world. By the numbers, the new … to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… production, nutrient cycling, greenhouse gas emissions, and water recycling.” Tringe is the interim director of Berkeley … Systems group. The award ceremony was held January 19, 2021. Learn more here in the Berkeley Lab story.   …
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Forest Fungi, Seagrass, and a New View of Symbiosis
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CSP Large Scale Call
… clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even lighter … Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the …
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