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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in …
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The Busy World of Deep Sea Eruptions
The ocean depths are vast and dark. But there are hotspots on the ocean floor … and understanding how they’ve adapted to this extreme environment.   …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … per team. Participants will be expected to have some experience with OpenACC or CUDA – links to training …
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UC Merced Interns Reflect on Their JGI Summer Projects
… this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission … but virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. … an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of … Facility located at Berkeley Laboratory, built off past experience in developing a secondary metabolites portal …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the … Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … that offered a handful of graduate students summer research experience at the JGI. On July 26, 2018, the JGI celebrated …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … new investigator proposal last year, and he noted that the experience proved beneficial for the large-scale call. “I am …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and … collaborative working environment I have consistently experienced each visit through my PhD. This environment …
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Network Modeling of Complex Data Sets
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Representing sex chromosomes in genome assemblies
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