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First Monoploid Reference Sequence of Sugarcane
… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … genomes are more difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in … reference sequence. For the highly polyploid sugarcane, an international team of researchers has successfully assembled …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … of microbial communities (metagenomics) and a chemical labelling approach. The Impact Altiarchaea are abundant and … The work was co-led by Victoria Turzynski in Alexander Probst’s lab at the University of Duisburg-Essen …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), embarked on a pilot project with … the refuge to collect soil samples from multiple locations. Back in the classroom, JGI researchers walked students …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed … focus.”  To bolster the already existing collaborations, Alexander Probst, initiator of the meeting and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering … assemblies, portals that make data available to the public, and our institutional website.   Mr. … the sequencing core at Exelixis Biopharmaceuticals as an intern, he joined the JGI as an Instrumentation Engineer …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … of the road to collect small weedy plants and bring them back to the lab. The weedy grass was green millet (Setaria viridis), a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … via the appointment calendar for technical help, feedback or a guided walk-through of the new Data Portal.  …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … produced by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In … to learn more about the program's areas of focus, major initiatives and more.  …
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