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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of their diversity we've actually captured,” said co-first author Dongying Wu, a member of the Functional Annotation … biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI project, and the Functional Genomics call is for …
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Natural Prodcast Episode 8: Eric Schmidt
… can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … And that’s related to what my project is with the JGI. Where, it’s again, with ribosomal peptides, we’re … DAN:  Yeah. Do you want to talk a little more about your JGI project?  ERIC:  Sure. So with that project, we’re …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Gut Fungi: Unexpected Source of Novel Chemicals
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … In the lab, O’Malley and her team — notably, first author Candice Swift — verified that the fungi expressed … Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). CLS is also supported by a National Science …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… may be akin to finding a single snowflake on a colored-in page of that book. Published online September 28, 2022, in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a senior investigator at the NCBI and one of the senior authors on the paper, of the uncovered viral diversity. …
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Jeremy Schmutz
For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … sequence of the model plant Setaria. Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. …
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2025 NeLLi Symposium
Dartmouth University See full agenda at the bottom of this page. … Check back for information on venue and lodging.  … … 48″ wide or less to ensure 2 posters fitting on the boards. JGI posters are typically printed in the ARCH E size which … … Where to stay? … How do I submit an abstract? … Refunds … JGI Organizers … External Organizers … Jasmine Bunn , …
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Busting the Unbreakable Lignin
… lignin can, in fact, be deconstructed without oxygen. Lead author Tom Lankiewicz cultivated anaerobic fungi … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential … eventually yield new biotechnological opportunities.  … The authors acknowledge their funding sources: Office of …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User … to contact? A:  Contacts are listed on the proposal call page. Feel free to  reach out to any of them with questions. …
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