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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … to thrive outside aquatic environments. The Impact A deeper understanding of how plants adapted to terrestrial … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a … of the National Academy of Sciences , a team of researchers has found numerous examples of polycistronic … gene prediction algorithms. I decided to dig in a little deeper, and realized what was really happening,” recalled …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression … Cell and provides a community resource that could help researchers track cell development and how they determine …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … to learn more about the program's areas of focus, major initiatives and more.  …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two … 11 proposals for support from 53 received through a joint research call. Submitted proposals addressed one of the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The … or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the University … approach to infecting and metabolically reprogramming the bacterial host, which was transformed into two very …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused on … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science … catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of … shotgun sequencing. The team first tested the approach on bacterial laboratory models to set a reference for its …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … in development of new, advanced mass spectrometry research products such as stable isotope probing (SIP) to … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, …
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