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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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2024 Progress Report
… use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … year include:  A decade of work led by an international consortium culminated in a reference for the complex  …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … species encode a sulfate reduction pathway, but also have genes for sulfide oxidation. The findings lead them to …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… in their proposal as long as they’re staying under the sequence cap? A(nswer): Proposals that are looking at … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint … at the NRAP site. However, the microbial strain’s genome sequence was not in IMG/M when the NRAP samples were … (NCRR) (5P20RR016480-12) and the National Institute of General Medical Sciences (NIGMS) (8 P20 GM103451-12) from …
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An Integrated Dataset to Understand Ecosystem Interaction
Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … mechanisms for adaptation within the trees. The data set generated is 25 terabytes in size. Resources for genomic … our understanding of plant-microbe interactions — with potential applications in sustainable forestry and …
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities that seek to … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the …
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Boosting Small Molecule Production in Super “Soup”
… (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that enhanced their … the carbon flux, we can avoid transport limitations to potentially reach even higher productivity and that’s one of …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI Launches Latest Strategic Plan
… over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … and ESnet, as well as externally to prospective partners to generate awareness of and clarity about the JGI’s strategic …
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