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Webinar: Introducing the BioSANS capability
… on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, … which now hosts upwards of 250 plant genomes and has been under active development for over 5 years, provides users with …
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Styling for Safety: PPE, It’s the JGI Way
… the minimal PPE requirements when actively working include safety glasses, lab coats, gloves, long pants that cover … Over the last few months, we found an increasing number of colleagues missing elements of the required PPE in the … To address this issue, we launched a PPE Campaign to provide our colleagues with a visual representation of JGI PPE …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… microbial genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … in genomics. Enter GenomeOcean, a powerful generative model  now available to the global research community able to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … is more than just a funny word. The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper understanding of the bacteria potentially holds the …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. … work at Berkeley Lab, Doina Ciobanu generally works at a single-cell level as part of the JGI MicroScale Applications …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … ninety percent of Florida groves are infected. To better understand how trifoliate orange is able to resist citrus … sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … it can thrive in the soil as a saprophyte, living off decaying organic matter, or as an endophyte, living between … found among and within poplar trees, and in an effort to understand its influence on the plant, a team of scientists …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact …
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Mike Sneddon
… Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … for science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale …
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Benjamin Cole
… Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing … cells respond to their biotic environment using emerging single-cell characterization technologies (scRNA-seq, … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic …
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