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Boosting Small Molecule Production in Super “Soup”
… environments? (Spoiler: Yes.) Yeast strains engineered for the biochemical conversion of glucose to value-added … viability constraints. Cell extracts provide an alternative format for chemical synthesis in the absence of cell growth … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … by our new switchgrass manuscript , we plan to use existing data as well as generating additional genomic resources to …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative user program. The portfolio of … advanced genomic capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) …
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Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine … offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage … The team also identified previously unknown promoter sequences within these gene clusters, offering new …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented …
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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes … Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 …
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Fishing for Novel Cellulose Degraders
… The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed with feathers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity …
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Medium-Chain Fatty Acid Synthesis by “Candidatus Weimeria bifida” gen. nov., sp. nov., and “Candidatus Pseudoramibacter fermentans” sp. nov.
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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