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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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Floodplain nitrifiers harbor the genetic potential for utilizing a wide range of organic nitrogen compounds
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was … human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed … improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  …
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DAP-seq Drives Robust Mapping of Gene Regulation
… view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … of where those binding sites are in the genome — those sequences are moving around, disappearing and appearing in … this technology is available to JGI users for studies on organisms with smaller genomes, such as bacteria and certain …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Community Resource for Secondary Metabolite Researchers
… Collaboratory encourages user engagement. The Science In addition to the core set of "primary … living creatures for energy, growth and reproduction—most organisms produce a set of "secondary metabolites," chemical … time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available …
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Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Architecture, catalysis and regulation of methylthio-alkane reductase for bacterial sulfur acquisition from volatile organic compounds
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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