Results
… of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment to the JGI. The documents below (posted with permission) demonstrate the importance of proper nucleic acid … & quality requirements for samples submitted to the DOE JGI. DNA Preparation Guidelines RNA Preparation …
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… JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best … assembly of environmental microbiomes.” JGI’s Chief Informatics Officer Kjiersten Fagnan touted the … excited to be able to offer this capability to the JGI user community moving forward and to assemble, for the first time …
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… of salary, I really got busy and I started to create a program that involves researching the local marine … of adventure that was different from wandering through a rainforest and picking up a mushroom. It required, I must say, … Ecology that has a marine component. And really the community out there now understands this fact very well. So …
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… to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … having reference Chaetoceros genomes would provide more information on these ecologically relevant species. Another …
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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its Community Science Program . And the work is part of a larger CSP Functional … National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) for …
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… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high …
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… these fungi detect which complex chains are available; this information triggers pathways to determine which enzymes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
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… the organism’s ecology, mostly based on literature and user community inputs. We also have the potential to create … – reach out to us. 3. Q: Can you use NCBI taxonomy information to search your interactive tree? A: Sure, if you … (see video on comparative tools) 5. Q: Is there any programmatic access to the portal? Or any data and metadata …
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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on a pilot project with biology students from Boca Raton Community High School in Palm Beach County, Florida. The … reached Emiley Eloe-Fadrosh , who heads the Metagenome Program . “After discussing the project with him, I was …
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… as metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … annotation and functional prediction for phage proteins user-friendly integrated pipelines (MVP) and databases … Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG). …
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… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … launched as an interactive public database for the research community. With more than 13 million BGCs in the catalog at … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data. The SMC ( …
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