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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published … a crop. The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information …
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JGI Scientists Pen Genome Watch Articles
… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … and maximize the benefit to society. Inspired by the Human Genome Project (HGP), and building upon the principles for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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Mapping the Earth’s Hidden Fungal Kingdom
… Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … toward 10,000 annotated genomes, this infrastructure advantage becomes even more critical. With roughly half of all …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & …
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked to conditions such as … Chromosome 19, which contains about 2% of the human genome. They were interested in genes involved in repair of …
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Tapping the treasure trove of atypical phages
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A More Intuitive Phytozome Interface
… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … them to reconstruct more near-complete genomes from soil metagenomes compared to other methods. The Impact … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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