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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … Plant Science Center.  This work is the result of an international collaboration, beginning with the work of the late … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … was preparing to teach a second year A-Level Advanced International Certificate of Education (AICE) Biology class at … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers … payloads, such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic … But now, with Cas9, CRAGE can be used for precise genome editing. This means that scientists can modify gene …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … which combines an in vitro transcription assay with RNA sequencing, they were able to identify the target genes … Transcription in eukaryotes is handled by three distinct RNA polymerases; in bacteria there is only one type of RNA …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, … with pivotal applications in biotechnology, such as DNA editing enzymes.” Leveraging Protein Families in a New Way …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … drug from the microbes in that soil, there are now international regulations that provide a structure for ensuring … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, … protein parts of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an … inside the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … biofuels . Since one of the challenges of developing alternative fuels from plants is the high cost and resource …
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