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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So … to its mouth. We’ll have to put a picture of this on the website.  DAN: I guess looking at these is kind of like …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into … culmination of nearly a decade of work to develop genomic resources for drought tolerance in perennial grasses. The …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   The Impact This dataset … First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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Biases in genome reconstruction from metagenomic data
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact … Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, …
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Searching for fat tails in CRISPR-Cas systems: Data analysis and mathematical modeling
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … geographic regions and growing conditions.  This work was enabled by developments in sequencing and analysis methods … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal … model with PhycoCosm, how do we go about getting it in your system? A: I think the best way is to contact us for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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