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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating … synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to take on … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Webinars on Offerings & Capabilities
… are a list of webinars that can help you through the submission process by better understanding the capabilities and resources available for your project. Watch all the webinars here . You can find additional webinars covering how to use our data portals here.  …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art … into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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The parallelism motifs of genomic data analysis
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Rice SNP-seek database update: new SNPs, indels, and queries
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:             … for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their … Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee … in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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