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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts to … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … Publications … Program Director, Berkeley NHGRI Training Program in Genomics and Computational Biology …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of … to experimental manipulation in the laboratory because of its compact genome, diploid nature, self compatibility, …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, kumquats, …
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Draft genome sequence of Muricoccus roseus DSM 14916T, isolated from a children’s care center in Finland
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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JGI-USCCN Strain Sequencing Opportunity
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an introduction to …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can access — ‘What are they …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … senior authors. “It offers us the possibility to explore genomically the whole complex of progenitors and descendant … of polyploidy.” Evaluating Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the JGI’s  …
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