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Three Join the JGI User Executive Committee
… The JGI User Executive Committee (UEC) recently welcomed three … and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… and Sheree Yao. ] ] The JGI welcomed 14 scientists selected for our 2026 Community Science Program Large Scale call. … (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Viral Genomics Group
… measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question … metagenomics and metatranscriptomics provide invaluable information on virus diversity and activity in microbial … interactions occurring in microbiomes, these omics data must be complemented with single-cell resolution assays …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Tour the IGB
… zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of … the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …
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Plant Microbial Interactions Group
… experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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Synthetic Biology Lab
… technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the production of large, … For further details, please reach out to the Group Lead …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they …
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JGI Scientists Pen Genome Watch Articles
… Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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