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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
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The JGI announces 2024 awardees for our Community Science Program annual call
Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting … CSP proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … (Alignment fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes … speciation events within existing species. Within the JGI’s production pipeline, ANI is used to ascertain the …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in …
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Plant-Microbial Interactions Group
… patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- …
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Metagenome Program
… viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … of flavin independent monooxygenases with the help of JGI’s DNA synthesis grant. And that having a whole panel of … has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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