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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support … on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …
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Making a Lichen Together
The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, the team …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … — but the experts we were able to work with on this project to ask questions about structure and function,” …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … resources for genomic research and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …
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