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Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
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Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities
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JGI Workshop at 2025 Aquatic Sciences Meeting
… Details forthcoming at ASLO 2025 Aquatic Sciences Meeting …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… The collaboration between the JGI and the Foundry on this project highlights an  ongoing partnership that combines the … Summary Wastewater treatment involves removing the organic matter before it re-enters the environment. Urine accounts … million annually.  The team is working on developing new microbial strains that can synthesize other bio-based …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… thoughts, and explorations that has led to groundbreaking science and opportunities to speak on a national level. A … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to … Senior Assistant Dean and CFO of the School of Natural Sciences Ernie Costello beamed as he spoke of what the …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … a lab environment, shining a light into this “biological dark matter.”  It also offers CRISPR a point of entry. By using … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under contract DE-AC02- …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … and small molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways … was sponsored by the U.S. Department of Energy, Office of Science, Biological and Environmental Research. Oak Ridge …
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Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean
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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… our collaborations and capabilities to enable great science that will help solve energy and environmental … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … of key microbial culprits in carbon fixation in the dark ocean. Combining single cell genomics and synthetic …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… may have been important in early Earth conditions. The Science Through a combination of sequencing tools and … applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … role in the development of life on Earth; the iron-oxide microbial mats at Yellowstone offer researchers an analog …
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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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