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Dan Rokhsar
Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational … Dr. Rokhsar joined the faculty of University of California, Berkeley in 1989, as a member of the Physics Department and … and Development after his research interests shifted from condensed matter physics to computational biology, …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … gene duplications, and even more ancient gene transfers from bacteria have all armed the plant with an array of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) took on the Open …
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Dispatches From JGI Interns
Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into …
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Poisson hurdle model-based method for clustering microbiome features.
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, indicates metabolic pathways …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . … learn the value of their item. Part of that pleasure comes from finally having an answer to the question, “Why bother … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and at …
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State … Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Genomes OnLine database (GOLD) v.7: updates and new features
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Obligate biotrophy features unraveled by the genomic analysis of rust fungi
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds … led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal …
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