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Nikos Kyrpides
… global metagenomics. Nature . 578:432-436 Roux S. et al. 2019. Cryptic inoviruses are pervasive in bacteria and … across Earth’s biomes. Nature 4:1895-1906 Sberro H. et al. 2019 Large-Scale Analyses of Human Microbiomes Reveal …
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Three Join the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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Matt Blow
… regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the U.S. Department of Energy … distinguish males and females even when plants with multi-year generation times are young and haven’t physically …
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Secondary Metabolites Program
… genomics, biodesign and metabolomics capabilities to identify, express and characterize bioactive secondary metabolite … Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and have expanded … Report Card toolkit (HERC-tk) to enable users to identify the best host to express their BGC(s). This is based on …
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From Competition to Cooperation
… with plants (mycorrhizae), and particularly how fungi that feed on decaying plant matter (saprotrophs) have … allow host plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, these … Program of the Hungarian Academy of Sciences (Grant No. LP2019/13-2019) and the National Research, Development and …
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Rex Malmstrom
… approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to … mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin … 2016. Visualizing in situ translational activity for identifying and sorting slow-growing archaeal− bacterial …
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JGI@25: Strengthening Soybean
… grow discolored and rust pustules develop as the pathogen feeds on its soybean host, which is maintained alive. Once a …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… the health care to the financial sector — whether to identify studies and protocols or analyze and predict market … the various machines. You’d go find the cash converter box, feed it a $1, $5 or $10 bill and receive a set amount of … by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students coming to the DOE … funded by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah … plant root exudates on the plant microbiome. This year, however, there was a new aspect to the project - they …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… scientists want to take a further look into identifying genes related to biotic stresses to better understand … (ANR LEVEL-UP ANR-21-CE20-0010-01) to C.J., from ZhuJiang (2019ZT08N628) and the National Natural Science Foundation of …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art … six researchers accepted for 2023. Proposals are accepted year-round; the next deadline is Jan. 29, 2024.  …
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