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Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The …

Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …

Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all known virophage genomes share only four genes in common: major and minor …

… technologies have led to an abundance of microbial genomes becoming available to the global research … a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually … Data Science group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” …

… for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic … Metagenomic discovery of biomass-degrading genes and genomes from cow rumen . Science 331, 463-7. Visel A , Zhu …

… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … and improve the quality of metagenome-assembled viral genomes . The Impact The microbes that play key roles in … DNA sequencing can help scientist to recover the genomes of these viruses and associate them with their …

… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …

… to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples around the … and already available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  … and improve the quality of metagenome-assembled viral genomes. The paper appeared in  Nature Biotechnology . Igor …

… start of a beautiful collaboration,’” Alper said. “We’re exploring not just what can be enabled by this technology, …

… than historically presumed — widening the avenues for exploring methane as a source of bioenergy, better …