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Workforce Development & Education Outreach
… to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's activities in this space.       Learn more …
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … of the genes in a lipid-prolific yeast. The Impact The team used this set of guide RNAs on  Yarrowia lipolytica to … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI … work. This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Sequencing Submission Requirements for DNA Synthesis
… include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, … Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Dynamics and activity of an ammonia-oxidizing archaea bloom in South San Francisco Bay
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … including researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … specific features or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI … assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already demonstrated …
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Plant Program User Advisory Committee
The Plant Program Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the plant program. The committee serves as the program's …
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives for the … panel for the JGI’s Director, CIO, and Deputies. The IAC does not perform management functions, nor does it direct …
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2024 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …
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