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Impacts of Maize Domestication and Breeding on Rhizosphere Microbial Community Recruitment from a Nutrient Depleted Agricultural Soil
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China … is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal … but also because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related …
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j5 DNA Assembly Design Automation
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Fungus Fuels Tree Growth
… elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or … (Sunny) Liao of the University of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes …
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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Expansion of the global RNA virome reveals diverse clades of bacteriophages
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Matt Blow
Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow carried out … transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … BS in … Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living …
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Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
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JGI Announces 2023 Community Science Program Awardees
… year’s recipients on our Twitter. Samples were collected from across a permafrost age gradient from the Fox permafrost tunnel near Fairbanks, Alaska. … inter-organismal interactions, understanding natural communities important for carbon storage, nutrient cycling, …
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling … Florida, they encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US … JGI researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an …
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