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Elviz – exploration of metagenome assemblies with an interactive visualization tool
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Multifunctional cellulases are potent, versatile tools for a renewable bioeconomy
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Partnerships Development Team
… high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. … … SPPs enable research funded by an Industry partner to perform a defined scope of work using the JGI’s unique … carbon emissions to make fuels and chemicals, improving air quality and promoting a circular economy. Acetogenic  …
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MicroSyn: A user friendly tool for detection of microsynteny in a gene family
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … Applications group at the JGI, whose team uses a semi-automated, standardized process to carry out the onerous SIP … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …
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De novo Nanopore read quality improvement using deep learning
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
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Towards a genome-based virus taxonomy
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … to develop guidelines and best practices for defining virus data quality. Reported in Nature Biotechnology, the …
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ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond to …
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