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Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … in multicellular organisms. During his postdoctoral training at Lawrence Berkeley National Laboratory, he …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding … traits that are desirable from a biofuels production perspective. By using genomic database alignment tools, … This work was supported by the Australian Research Council (grant … by FAPDF grant “Nextree” 193.000.570/2009. For the portion of the work conducted by the Joint Genome Institute and …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for … streamlines project management, laboratory information tracking, and enables efficient analysis and reporting of … BS in Electrical Engineering, University of New South Wales, Australia; MS …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… As part of the ongoing partnership between DOE JGI and UC Merced to promote … a true testament of the hard work and caliber of our first-generation students and the amazing mentorship they receive from our faculty.” Cristhian and …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL … foster discussions centered on how to capture, define, quantify, and functionally characterize microbial diversity. The … us to contribute to discussions and provide an editorial perspective. View the Jamboree agenda here     …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … The Plant Program advances our understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, agriculture and the environment. At its …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … grams per Liter per hour,” Jewett said. “From the academic perspective we’re able to be in this range in the absence of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents that …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the … grams per Liter per hour,” Jewett said. “From the academic perspective we’re able to be in this range in the absence of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
Learn more
GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … and other publicly available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — … — similar to the way LLMs learn grammar and context.  This training empowers GenomeOcean to predict the biological …
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