Search

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and … in microbiome data science. … National Energy Research Scientific Computing Center … DOE System Biology Knowledgebase … …

Before 2006, Olpidium was one of the many obscure fungi of … Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic …

Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of these plant genome sequences also led researchers to identify a gene related to seed dispersal in wild populations … agriculture, learning, and commercialization. Opened in 2008, HudsonAlpha’s vision is to leverage the synergy between …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The …

… process for AAM Fellows is based on their records of scientific achievement and original contributions that have … genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … proteins, and virus diversity in this group expanded 10-fold, offering the opportunity to refine the phylogenetic …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. …

Metagenome-assembled archaeal genomes provide new insights into … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … and short-chain alkane oxidation metabolisms. They also identified a set of 38 marker genes that serve as a core set of …

… has done a really nice job of providing that general scientific audience whereas now I’m sitting here with two people … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … between the JGI and Bigelow Lab led to the identification of key microbial culprits in carbon fixation in …

… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …

… which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …