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… One of the JGI’s key assets is our user community, … who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data life …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …

… of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …

… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … they are, a recent data set  outlined in  Scientific Data connects molecular features to large ecosystem-level … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …

… Database provides details on river microbes in 90% of US continental watersheds. The … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

… (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of … Laccaria bicolor on MycoCosm … Laccaria bicolor has a symbiotic relationship with poplar …

… at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …

… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes …

… Using a novel computational approach, researchers confirm microbial diversity is … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … families. From there they focused on families with at least 100 members.  “If you have 100 sequences, the quality of the …