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Natural Prodcast Episode 2: The Primer, Part 2
… pathways. Not every organism, at least, has something that’s maybe obvious or notable. We are still in – not an … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …
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How to Submit Sequencing Samples
… of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment …  Provide your shipping address to receive barcoded plates that should be used to ship your samples to the JGI. Samples that have not been approved to ship or are not sent in …
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Natural Prodcast Episode 20: Brian Bachmann
… a lot longer than we did, and I can say without reservation that Brian is one of the smartest people I’ve ever had the … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, …
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Microbial Program
… large-scale genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and … with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial … sequencing of underexplored bacterial and archaeal lineages that are important for bioeconomy applications. By expanding …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… for you. A lot of this is based on a really great paper that came out in 2020 where this is all explained in detail, … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
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Products
… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …   Please review the call language carefully to ensure that your request is appropriate for that call. Learn more about the  average base outputs for …
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Natural Prodcast Episode 22: Alison Narayan
… I hope she’ll accept this description, but I’d say that Alison is not one of the more normal kinds of natural … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… when we start talking to people who specialize in that area. In this primer, we talk about my favorite topic … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …
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Natural Prodcast Episode 6: Marc Chevrette
… the very first episode we recorded. You’ll probably notice that the audio quality isn’t as good as what you’ll hear in … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …
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Who We Are
… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …
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Natural Prodcast Episode 7: Ben Shen
… for Industrial Microbiology Natural Products conference that was held last January. Ben was the organizing chair of … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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Natural Prodcast Episode 18: A CSP Primer
… all the way to the end, then you’ve probably heard me say that the Joint Genome Institute is a “Department of Energy … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …
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