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…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … compounds, again, that were different, different structure types. We started amassing a collection of marine bacteria. … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … They’re not sealed off and closed. But there’s definitely types of organisms that are living there. And we’ve moved …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and environment. And so we know that lots of different types of organisms make lots of different types of … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

The mission of the Joint Genome Institute is to serve the … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … groups are working on this area on the ribosomal peptides. Types of things you can do: By changing these properties, … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

See below for a list of Frequently Asked Questions about our proposal … on the call link to see specific details including project types supported, sample/capacity limits, and instructions.  … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to …

… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these … et cetera, depending on the product. We push different types of data sets to GenBank and CPI. MENAKA WILHELM: Is …

The JGI has a strong interest in seeing that the data produced by … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and engineering …

The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … as far as mixed halogenation, di-halogenation. And types of processes that one could imagine biocatalysts being …