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Data Policy
… for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community … for their planned work.   … For sequencing or metabolomics projects: data are subject to a  one-year embargo .  For … offerings and are unrestricted for use. … For DNA synthesis projects: data are subject to a  two-year embargo starting …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… the normal amount that we get, which is already a fairly small number. We’re a very niche podcast. And so maybe if we … on identifying and characterizing haloperoxidases from bacteria. And with Christian, I started getting a little bit … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …
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Natural Prodcast Episode 1: The Primer, Part 1
… chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your crazy Aunt is posting on Facebook about cinnamon or turmeric curing every … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Natural Prodcast Episode 7: Ben Shen
… toxic molecules, and that human beings know, today, for small molecules. So they’re in the picomolar range. ALISON: … benefits. DAN: Now, you and I are working together on a project at the JGI to try to find new enediyne clusters and … origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the 40,000 from bacteria, there’s …
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Single Cell Research Group
… of microbial metabolism towards a minority of cultivated bacteria, still persists to date. Research Team    … … show that the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …
Learn more
Strain Engineering
… years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no … strains represent an additional phase of user-accessible project types, in which DNA-based molecules can be …
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Natural Prodcast Episode 15: Katherine Duncan
… around countries. And I was actually in Croatia on a small island off the coast in the Adriatic Sea, and I … biology classes in undergrad, but my PhD was an actinobacteria. And I tell all my students this now, but when I … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the natural … The pangenomes enable the exploration and identification of small and large structural variation — this variation drives … processes through model laboratory ecosystems. They are small plastic growth chambers where plants grow without …
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Natural Prodcast Episode 11: Marnix Medema
… on synthetic biology of engineering gene expression in bacteria – however, the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from … tiny precursor peptide, encoding genes that encode the very small precursor peptides that end up being …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… find, things that are of interest. And usually, in terms of bacteria and secondary metabolism, those things that we want … any water that washed down off the hills might carry small pieces of gold along with them and end up in the beds … And so when I came into graduate school, I worked on that project. And it was working exactly that same kind of way, …
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Natural Prodcast Episode 12: Nadine Ziemert
… miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports … they spread, why do they spread in a certain way from one bacteria to another, how do they change then, and why are … hard to make a full story out of that yet. So we have some small, little stories, all the time. We have compared three …
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Natural Prodcast Episode 2: The Primer, Part 2
… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … yeah, so these guys, it turns out, produce lots of really small molecules that they use to communicate – lots of … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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