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CSP Functional Genomics
… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … information sharing. We also recognize the need to have a limited and time-sensitive protection of certain types of data … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …
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Publication Policy
… contributions, ensure that all contributors to a research project are appropriately recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben …
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Metabolomics Program
… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome … A primary purpose of this project is to bring educators from a broad range of …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …
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