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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … a lot here about the terminology we use and where it falls short, and maybe what we should be saying to be more clear … is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … program aims to tap into the largely unexplored biochemical diversity within secondary metabolites, expanding their …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … UCSD. So I was with Brad during my PhD, and then I did a short postdoc with Christian Hertweck in Jena in Germany and … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is … it is that secondary metabolism is ancient and, therefore, widespread. So if secondary metabolism was there when– and …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … see. So it doesn’t seem to be a correlation between biodiversity in taxa and biodiversity in secondary metabolites. …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … A few examples of those are obviously expanding the diversity of known secondary metabolites and their … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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