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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  … ) to enable the research community to perform large-scale multi-omics analyses on new and existing microbiome data.   …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …
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Data Policy
Data produced and released by the US Department of Energy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … use-restricted data. JGI proposals typically include multiple projects of different types which can span several …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of … microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … garden ant as well as the American honeybee. And so I have multiple opinions which I’m never short of but. In terms of …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of … usually very beneficial to the field. It’s very, very, very multidisciplinary, is the usual term for that. So yeah. … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … advisory committee, you serve as ambassadors for the JGI guided by these Stewardship principles referred to above. …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy … about all that chemical diversity. So there are two ways of approaching it. One is there is a school of thought that … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once … it’s unclear why this is so rarely detected.” Developing Approaches for Reconciling “Real” Big Data For the team, the …
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